Gene regulation

Determination of the gene regulatory network of a genome-reduced bacterium highlights alternative regulation independent of transcription factors
Here, we determined the relative importance of different transcriptional mechanisms in the genome-reduced bacterium Mycoplasma …
PDF Cite DOI
Determination of the gene regulatory network of a genome-reduced bacterium highlights alternative regulation independent of transcription factors
Alternative transcriptional regulation in genome-reduced bacteria
Transcription is a core process of bacterial physiology, and as such it must be tightly controlled, so that bacterial cells maintain …
PDF Cite DOI
Insights into the mechanisms of basal coordination of transcription using a genome-reduced bacterium
Coordination of transcription in bacteria occurs at supra-operonic scales, but the extent, specificity, and mechanisms of such …
PDF Cite DOI
Bacterial antisense RNAs are mainly the product of transcriptional noise
cis-Encoded antisense RNAs (asRNAs) are widespread along bacterial transcriptomes. However, the role of most of these RNAs remains …
PDF Cite DOI
Distinguishing between productive and abortive promoters using a random forest classifier in Mycoplasma pneumoniae
Distinguishing between promoter-like sequences in bacteria that belong to true or abortive promoters, or to those that do not initiate …
PDF Cite DOI